| 1 | 1 | Heule | Christian | Rendementhypo Cycling Team | 1:02:45,9 | - |
| 2 | 7 | Ausbuher | Kamil | Exe Jeans | 1:02:58,0 | +0:12,1 |
| 3 | 43 | Damiani | Luca | Colavita/Sutter Home | 1:02:58,1 | +0:12,2 |
| 4 | 35 | Kyzivat | Vladimir | Johnson Controls AS ML BOL | 1:03:08,4 | +0:22,4 |
| 5 | 2 | Flückiger | Lukas | Trek | 1:03:09,7 | +0:23,8 |
| 6 | 15 | Ponta | Marco | C.S. Esercito Italiano | 1:03:16,7 | +0:30,8 |
| 7 | 3 | Wildhaber | Marcel | Scott-Swisspower MTB Racing | 1:03:46,2 | +1:00,3 |
| 8 | 16 | Gambino | Alessandro | C.S. Esercito Italiano | 1:03:54,0 | +1:08,1 |
| 9 | 6 | Ursi | Fabio | C.S. Esercito Italiano | 1:04:12,6 | +1:26,7 |
| 10 | 49 | Falaschi | Bryan | Sella Italia Guerciotti | 1:04:23,5 | +1:37,6 |
| 11 | 10 | Moser | Andreas | Bürgis Cycling Team | 1:04:27,6 | +1:41,7 |
| 12 | 4 | Lang | Pirmin | Delta Elite Team/ VC Pfaffnau | 1:04:45,3 | +1:59,4 |
| 13 | 9 | Lang | Rene | Delta Elite Team/VC Bützberg | 1:04:51,4 | +2:05,5 |
| 14 | 5 | Wellens | Geert | AVB-Cycling Team | 1:05:02,7 | +2:16,8 |
| 15 | 38 | Bambula | Ondrej | CT Budvar Tábor | 1:05:22,3 | +2:36,4 |
| 16 | 8 | Metlicka | Vaclav | Prodoli Racing Team | 1:05:34,2 | +2:48,3 |
| 17 | 29 | Winterberg | Lukas | Weishaupt-cycles / VC Pfaffnau | 1:05:37,4 | +2:51,5 |
| 18 | 41 | Flückiger | Matthias | Trek | 1:05:45,6 | +2:59,7 |
| 19 | 30 | Cop | Kristof | AVB-Cycling Team | 1:06:20,9 | +3:35,0 |
| 20 | 25 | Büchi | Benjamin | GS Domaine du Frigoulet | 1:06:29,9 | +3:44,0 |
| 21 | 20 | Corminboeuf | Yves | Scott/NewWork/SRAM/Le Maréchal | 1:07:08,8 | +4:22,9 |
| 22 | 12 | Frei | Peter | Hobi-Bau / VC Hittnau | 1:07:23,9 | +4:38,0 |
| 23 | 32 | Soukup | Josef | Kolokram.cc-Scijany | 1:08:18,0 | +5:32,1 |
| 24 | 39 | Prihoda | Lukas | Cyklistiky Hlinsko | 1:08:29,2 | +5:43,3 |
| 25 | 24 | STRACCIA | Michele | Team Co. Bo. Pavoni | 1:08:44,8 | +5:58,9 |
| 26 | 40 | Hunal | Markus | | 1:09:18,1 | +6:32,2 |
| 27 | 31 | Frey | Joël | Team Hörmann VC Pfaffnau Roggliswil | 1:02:50,0 | -1 LAP |
| 28 | 14 | Schneider | Sascha | Schneider-Cycling | 1:02:54,0 | -1 LAP |
| 29 | 33 | Chrobak | Jan | Johnson Controls AS MB | 1:02:57,1 | -1 LAP |
| 30 | 21 | Pavoni | Pietro | Team Co. Bo. Pavoni | 1:04:01,9 | -1 LAP |
| 31 | 13 | Allenspach | Matthias | Tower Sports-VC Eschenbach | 1:04:08,5 | -1 LAP |
| 32 | 42 | Müller | Christoph | Velo Reichmuth.ch | 1:04:14,5 | -1 LAP |
| 33 | 23 | Grandi | Alessandro | Team Co. Bo. Pavoni | 1:04:34,6 | -1 LAP |
| 34 | 45 | Drechsel | Heiko | RSC- Wilhelmshorst e.V. | 1:04:38,6 | -1 LAP |
| 35 | 47 | Reichen | Samuel | Haibike-Swiss IT Repair MTB | 1:05:46,7 | -1 LAP |
| 36 | 22 | Pavoni | Paolo | Team Co. Bo. Pavoni | 1:05:54,9 | -1 LAP |
| 37 | 19 | Belletti | Davide | Falchi Blu | 1:06:34,9 | -1 LAP |
| 38 | 50 | Meiller | Jeremy | ASPTT Mulhouse | 1:07:51,9 | -1 LAP |